Genomic variant #0000358087

Individual ID 00155308
Chromosome 18
Allele Parent #1
Affects function (as reported) Affects function
Affects function (by curator) Not classified
DNA change (genomic) (Relative to hg19 / GRCh37) g.53253330_5325347[ins(51_?)]
DNA change (hg38) -
Published as expanded >40 units
ISCN -
DB-ID TCF4_000150 See all 6 reported entries
Variant remarks incomplete penetrance
Reference PubMed: Mootha 2014
ClinVar ID -
dbSNP ID -
Origin Germline
Segregation yes
Frequency -
Re-site -
VIP 0
Methylation -
Average frequency (large NGS studies) Genomic location of variant could not be determined
Owner Johan den Dunnen




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

Haplotype     

ClassClinical     

RNA change     

Protein     
TCF4 NM_001083962.1 +/. 2i c.72+804_73-747[ins(51_?)] GCT[>40] pathogenic (risk) r.(?) p.(?)



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000156172 DNA PCRrp - - TCF4 3 Johan den Dunnen