Genomic variant #0000368790

Individual ID 00164306
Chromosome 2
Allele Both (homozygous)
Affects function (as reported) Affects function
Affects function (by curator) Not classified
DNA change (genomic) (Relative to hg19 / GRCh37) g.(?_47596644)_(47613753_?)del
DNA change (hg38) -
Published as del EpCAM
ISCN -
DB-ID EPCAM_000033 See all 2 reported entries
Variant remarks -
Reference AlMahamed 2017
ClinVar ID -
dbSNP ID -
Origin Germline
Segregation -
Frequency -
Re-site -
VIP 0
Methylation -
Average frequency (large NGS studies) Variant not found in online data sets
Owner Mamata Sivagnanam




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

ClassClinical     

RNA change     

Protein     
EPCAM NM_002354.2 +/. _1_9_ c.(?_-1)_(*1_?)del pathogenic r.0 p.0



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000165173 DNA SEQ - - EPCAM 1 Mamata Sivagnanam