Genomic variant #0000368823

Individual ID 00164303
Chromosome 2
Allele Parent #1
Affects function (as reported) Affects function
Affects function (by curator) Not classified
DNA change (genomic) (Relative to hg19 / GRCh37) g.(47596721_47600601)_(47604217_47606091)del
DNA change (hg38) -
Published as del Ex2-5
ISCN -
DB-ID EPCAM_000034
Variant remarks -
Reference Tang 2016
ClinVar ID -
dbSNP ID -
Origin Germline
Segregation -
Frequency -
Re-site -
VIP 0
Methylation -
Average frequency (large NGS studies) Variant not found in online data sets
Owner Mamata Sivagnanam




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

ClassClinical     

RNA change     

Protein     
EPCAM NM_002354.2 +/. 1i_5i c.(76+1_77-1)_(555+1_556-1)del pathogenic r.? p.?



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000165170 DNA SEQ - - EPCAM 2 Mamata Sivagnanam