Genomic variant #0000400765

Individual ID 00177000
Chromosome X
Allele Maternal (confirmed)
Affects function (as reported) Affects function
Affects function (by curator) Not classified
DNA change (genomic) (Relative to hg19 / GRCh37) g.48336557del
DNA change (hg38) g.48478169del
Published as IVS2+1delG
ISCN -
DB-ID FTSJ1_000017
Variant remarks -
Reference PubMed: Freude 2004
ClinVar ID -
dbSNP ID -
Origin Germline
Segregation yes
Frequency -
Re-site -
VIP 0
Methylation -
Average frequency (large NGS studies) Variant not found in online data sets
Owner Johan den Dunnen




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

ClassClinical     

RNA change     

Protein     
FTSJ1 NM_012280.2 +/. 2i c.121+1del pathogenic (recessive) r.121_122ins121+2_121+11 p.?



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000177891 DNA;RNA RT-PCR;SEQ - - FTSJ1 1 Johan den Dunnen