Genomic variant #0000420940

Individual ID 00195674
Chromosome 2
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
DNA change (genomic) (Relative to hg19 / GRCh37) g.47554933_47699909del
DNA change (hg38) -
Published as Deletion of Exon 1-11; g.26446264-?_26514134+?del
ISCN -
DB-ID MSH2_001624 See all 3 reported entries
Variant remarks -
Reference PubMed: Hampel 2005
ClinVar ID -
dbSNP ID -
Origin Germline
Segregation -
Frequency -
Re-site -
VIP 0
Methylation -
Average frequency (large NGS studies) Variant not found in online data sets
Owner Michael Woods




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

ClassClinical     

RNA change     

Protein     
MSH2 NM_000251.2 +/. 1_11i c.-75398_1759+1708del pathogenic r.spl p.(=)



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000196644 DNA ? - - MSH2 1 Michael Woods