Variant #0000425435 (NC_000002.11:g.47693959G>A, MSH2(NM_000251.2):c.1661+12G>A)

Individual ID 00200966
Chromosome 2
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.47693959G>A
DNA change (hg38) g.47466820G>A
Published as -
ISCN -
DB-ID MSH2_000995 See all 189 reported entries
Variant remarks -
Reference -
ClinVar ID -
dbSNP ID -
Origin Germline
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.3426 View details
Owner Jack Ji
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by InSiGHT - John-Paul Plazzer
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
MSH2 NM_000251.2 -/. 10i c.1661+12G>A r.spl? p.(=)



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000201936 DNA SEQ - screen date 2015-01-01 MLH1, MSH2, MSH6, PMS2 11 Jack Ji