Variant #0000426157 (NC_000002.11:g.47643534C>T, NM_000251.2:c.1042C>T (MSH2))

Chromosome 2
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.47643534C>T
DNA change (hg38) g.47416395C>T
Published as -
ISCN -
DB-ID MSH2_000058 See all 6 reported entries
Variant remarks Nonsense
Reference Sjursen, W., McPhillips, M., Scott, R. J. and Talseth-Palmer, B. A. (2016), Lynch syndrome mutation spectrum in New South Wales, Australia, including 55 novel mutations. Mol Genet Genomic Med. doi:10.1002/mgg3.198
ClinVar ID -
dbSNP ID -
Origin Germline
Segregation ?
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner InSiGHT - John-Paul Plazzer
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by InSiGHT - John-Paul Plazzer
Date created 2016-02-01 06:28:37 +01:00 (CET)
Date last edited 2019-02-22 10:39:02 +01:00 (CET)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
MSH2 NM_000251.2 +/. 6 c.1042C>T r.(?) p.(Gln348*)


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