Variant #0000454702 (NC_000018.9:g.(?_48573289)_(48591977_48593388)del, SMAD4(NM_005359.5):c.(?_-127-1)_(1139+1_1140-1)del)

Individual ID 00218756
Chromosome 18
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Effect unknown
Classification method ACMG
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.(?_48573289)_(48591977_48593388)del
DNA change (hg38) -
Published as deletion exons 1-8
ISCN -
DB-ID SMAD4_000140
Variant remarks ACMG PVS1
Reference Journal: Soer 2015
ClinVar ID -
dbSNP ID -
Origin Germline
Segregation -
Frequency -
Re-site -
VIP 0
Methylation -
Average frequency (gnomAD v.2.1.1) Variant not found in online data sets
Owner Karl Heinimann
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SMAD4 NM_005359.5 ?/? _2_9i c.(?_-127-1)_(1139+1_1140-1)del r.0? p.0?



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000219827 DNA SEQ - screening SMAD4 1 Karl Heinimann