Variant #0000507730 (NC_000001.10:g.46655200G>A, NM_001243766.1:c.1825C>T (POMGNT1))

Chromosome 1
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.46655200G>A
DNA change (hg38) g.46189528G>A
Published as POMGNT1(NM_001243766.2):c.1825C>T (p.R609W)
ISCN -
DB-ID LURAP1_000003
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 4.0E-5 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2023-01-11 15:44:22 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
LURAP1 NM_001013615.2 ?/. - c.-13899G>A r.(?) p.(=)
POMGNT1 NM_001243766.1 ?/. - c.1825C>T r.(?) p.(Arg609Trp)
TSPAN1 NM_005727.3 ?/. - c.*3995G>A r.(=) p.(=)
POMGNT1 NM_017739.3 ?/. - c.1825C>T r.(?) p.(Arg609Trp)


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