Variant #0000516405 (NC_000002.11:g.48915204C>A, NM_000233.3:c.1732G>T (LHCGR))

Chromosome 2
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.48915204C>A
DNA change (hg38) g.48688065C>A
Published as -
ISCN -
DB-ID GTF2A1L_000005 See all 2 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Nijmegen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Nijmegen
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
LHCGR NM_000233.3 +/. - c.1732G>T r.(?) p.(Asp578Tyr)
STON1-GTF2A1L NM_001198593.1 +/. - c.3441+16385C>A r.(=) p.(=)
GTF2A1L NM_006872.3 +/. - c.*8623C>A r.(=) p.(=)
STON1 NM_006873.3 +/. - c.*92763C>A r.(=) p.(=)


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