Variant #0000516409 (NC_000002.11:g.48941169T>C, NM_000233.3:c.561A>G (LHCGR))

Chromosome 2
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.48941169T>C
DNA change (hg38) g.48714030T>C
Published as LHCGR(NM_000233.3):c.561A>G (p.E187=)
ISCN -
DB-ID GTF2A1L_000008
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00037 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-08-06 14:59:34 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
LHCGR NM_000233.3 -?/. - c.561A>G r.(?) p.(Glu187=)
STON1-GTF2A1L NM_001198593.1 -?/. - c.3441+42350T>C r.(=) p.(=)
GTF2A1L NM_006872.3 -?/. - c.*34588T>C r.(=) p.(=)
STON1 NM_006873.3 -?/. - c.*118728T>C r.(=) p.(=)


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