Variant #0000517897 (NC_000003.11:g.130716581_130716584del, NM_001001486.1:c.2375_2378del (ATP2C1))

Chromosome 3
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.130716581_130716584del
DNA change (hg38) g.130997737_130997740del
Published as ATP2C1(NM_001199179.3):c.2375_2378delTTGT (p.F792Sfs*10)
ISCN -
DB-ID ATP2C1_000012 See all 17 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2023-04-16 21:50:28 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
ATP2C1 NM_001001486.1 +/. - c.2375_2378del r.(?) p.(Phe792SerfsTer10)
ASTE1 NM_014065.2 +/. - c.*16322_*16325del r.(=) p.(=)


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