Variant #0000520045 (NC_000003.11:g.47455755G>T, NM_015466.2:c.*1080G>T (PTPN23))
| Chromosome |
3 |
| Allele |
Unknown |
| Affects function (as reported) |
Probably does not affect function |
| Affects function (by curator) |
Not classified |
| Classification method |
- |
| Clinical classification |
likely benign |
| DNA change (genomic) (Relative to hg19 / GRCh37) |
g.47455755G>T |
| DNA change (hg38) |
g.47414265G>T |
| Published as |
SCAP(NM_012235.4):c.3509C>A (p.T1170N) |
| ISCN |
- |
| DB-ID |
PTPN23_000012 |
| Variant remarks |
VKGL data sharing initiative Nederland |
| Reference |
- |
| ClinVar ID |
- |
| dbSNP ID |
- |
| Origin |
CLASSIFICATION record |
| Segregation |
- |
| Frequency |
- |
| Re-site |
- |
| VIP |
- |
| Methylation |
- |
| Average frequency (gnomAD v.2.1.1) |
6.0E-5 View details |
| Owner |
VKGL-NL_Rotterdam |
| Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
| Created by |
VKGL-NL_Rotterdam |
| Date created |
2019-07-18 18:22:55 +02:00 (CEST) |
| Date last edited |
2020-03-23 16:13:27 +01:00 (CET) |

Variant on transcripts
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