Variant #0000520046 (NC_000003.11:g.47459211G>T, NM_015466.2:c.*4536G>T (PTPN23))

Chromosome 3
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.47459211G>T
DNA change (hg38) g.47417721G>T
Published as SCAP(NM_012235.4):c.2553C>A (p.S851R)
ISCN -
DB-ID PTPN23_000013
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SCAP NM_012235.2 -?/. - c.2553C>A r.(?) p.(Ser851Arg)
PTPN23 NM_015466.2 -?/. - c.*4536G>T r.(=) p.(=)


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