Variant #0000520068 (NC_000003.11:g.48507667T>C, NM_016381.4:c.-223T>C (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.48507667T>C
DNA change (hg38) g.48466268T>C
Published as ATRIP-TREX1(NR_153405.1):n.3242T>C
ISCN -
DB-ID ATRIP_000029
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_AMC
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_AMC
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2021-09-17 14:40:49 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 -/. - c.-223T>C r.(?) p.(=)
SHISA5 NM_016479.3 -/. - c.*2839A>G r.(=) p.(=)
TREX1 NM_033629.3 -/. - c.-68T>C r.(?) p.(=)
ATRIP NM_130384.2 -/. - c.*714T>C r.(=) p.(=)


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