Variant #0000520075 (NC_000003.11:g.48508055A>G, NM_016381.4:c.166A>G (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.48508055A>G
DNA change (hg38) g.48466656A>G
Published as TREX1(NM_033629.6):c.1A>G (p.M1?)
ISCN -
DB-ID ATRIP_000034
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 2.0E-5 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2022-11-01 13:01:21 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 ?/. - c.166A>G r.(?) p.(Met56Val)
SHISA5 NM_016479.3 ?/. - c.*2451T>C r.(=) p.(=)
TREX1 NM_033629.3 ?/. - c.1A>G r.(?) p.(Met1?)
ATRIP NM_130384.2 ?/. - c.*1102A>G r.(=) p.(=)


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