Variant #0000520077 (NC_000003.11:g.48508198dup, NM_016381.4:c.309dup (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Probably affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.48508198dup
DNA change (hg38) g.48466799dup
Published as TREX1(NM_007248.4):c.114dupC (p.T39Hfs*53), TREX1(NM_007248.5):c.114dupC (p.T39Hfs*53)
ISCN -
DB-ID ATRIP_000036
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2023-11-27 17:27:23 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 +?/. - c.309dup r.(?) p.(Thr104HisfsTer53)
SHISA5 NM_016479.3 +?/. - c.*2314dup r.(?) p.(=)
TREX1 NM_033629.3 +?/. - c.144dup r.(?) p.(Thr49HisfsTer53)
ATRIP NM_130384.2 +?/. - c.*1245dup r.(?) p.(=)


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