Variant #0000520090 (NC_000003.11:g.48508677G>C, NM_016381.4:c.788G>C (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.48508677G>C
DNA change (hg38) g.48467278G>C
Published as TREX1(NM_007248.2):c.593G>C (p.(Cys198Ser)), TREX1(NM_007248.4):c.593G>C (p.C198S), TREX1(NM_033629.6):c.623G>C (p.C208S)
ISCN -
DB-ID ATRIP_000041 See all 3 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 8.0E-5 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2022-05-09 15:51:19 +02:00 (CEST)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 ?/. - c.788G>C r.(?) p.(Cys263Ser)
SHISA5 NM_016479.3 ?/. - c.*1829C>G r.(=) p.(=)
TREX1 NM_033629.3 ?/. - c.623G>C r.(?) p.(Cys208Ser)
ATRIP NM_130384.2 ?/. - c.*1724G>C r.(=) p.(=)


Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our APIs to retrieve data.