Variant #0000520100 (NC_000003.11:g.48508922_48508939del, NM_016381.4:c.1033_1050del (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.48508922_48508939del
DNA change (hg38) g.48467523_48467540del
Published as TREX1(NM_007248.5):c.838_855delCCACTGGGTCTGCTGGCC (p.P280_A285del)
ISCN -
DB-ID TREX1_000023 See all 3 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Utrecht
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Utrecht
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2022-11-01 13:01:21 +01:00 (CET)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 +/. - c.1033_1050del r.(?) p.(Pro345_Ala350del)
SHISA5 NM_016479.3 +/. - c.*1576_*1593del r.(=) p.(=)
TREX1 NM_033629.3 +/. - c.868_885del r.(?) p.(Pro290_Ala295del)
ATRIP NM_130384.2 +/. - c.*1969_*1986del r.(=) p.(=)


Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our APIs to retrieve data.