Variant #0000524546 (NC_000005.9:g.140769008_140769031del, NC_000005.9(NM_018916.3):c.2424+42984_2424+43007del (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.140769008_140769031del
DNA change (hg38) -
Published as PCDHGB4(NM_003736.2):c.1545_1568del (p.(Ala517_Arg524del))
ISCN -
DB-ID PCDHGA1_000054
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 -?/. - c.-86676_-86653del r.(?) p.(=)
PCDHGA12 NM_003735.2 -?/. - c.-41319_-41296del r.(?) p.(=)
PCDHGB4 NM_003736.2 -?/. - c.1557_1580del r.(?) p.(Asp519_Phe526del)
PCDHGA1 NM_018912.2 -?/. - c.2421+56336_2421+56359del r.(=) p.(=)
PCDHGA10 NM_018913.2 -?/. - c.-23735_-23712del r.(?) p.(=)
PCDHGA11 NM_018914.2 -?/. - c.-31787_-31764del r.(?) p.(=)
PCDHGA2 NM_018915.2 -?/. - c.2424+48046_2424+48069del r.(=) p.(=)
PCDHGA3 NM_018916.3 -?/. - c.2424+42984_2424+43007del r.(=) p.(=)
PCDHGA4 NM_018917.2 -?/. - c.2421+31820_2421+31843del r.(=) p.(=)
PCDHGA5 NM_018918.2 -?/. - c.2421+22690_2421+22713del r.(=) p.(=)
PCDHGA6 NM_018919.2 -?/. - c.2424+12934_2424+12957del r.(=) p.(=)
PCDHGA7 NM_018920.2 -?/. - c.2424+4118_2424+4141del r.(=) p.(=)
PCDHGA9 NM_018921.2 -?/. - c.-13512_-13489del r.(?) p.(=)
PCDHGB1 NM_018922.2 -?/. - c.2409+36772_2409+36795del r.(=) p.(=)
PCDHGB2 NM_018923.2 -?/. - c.2421+26885_2421+26908del r.(=) p.(=)
PCDHGB3 NM_018924.2 -?/. - c.2415+16632_2415+16655del r.(=) p.(=)
PCDHGB5 NM_018925.2 -?/. - c.-8687_-8664del r.(?) p.(=)
PCDHGB6 NM_018926.2 -?/. - c.-18762_-18739del r.(?) p.(=)
PCDHGB7 NM_018927.3 -?/. - c.-28419_-28396del r.(?) p.(=)
PCDHGC4 NM_018928.2 -?/. - c.-95733_-95710del r.(?) p.(=)
PCDHGC5 NM_018929.2 -?/. - c.-99800_-99777del r.(?) p.(=)
PCDHGA8 NM_032088.1 -?/. - c.-3373_-3350del r.(?) p.(=)


Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our APIs to retrieve data.