Variant #0000524552 (NC_000005.9:g.140779777A>C, NC_000005.9(NM_018916.3):c.2424+53753A>C (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.140779777A>C
DNA change (hg38) -
Published as PCDHGB5(NM_018925.2):c.2083A>C (p.(Ile695Leu))
ISCN -
DB-ID PCDHGA1_000060
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00084 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 -?/. - c.-75907A>C r.(?) p.(=)
PCDHGA12 NM_003735.2 -?/. - c.-30550A>C r.(?) p.(=)
PCDHGB4 NM_003736.2 -?/. - c.2397+9929A>C r.(=) p.(=)
PCDHGA1 NM_018912.2 -?/. - c.2421+67105A>C r.(=) p.(=)
PCDHGA10 NM_018913.2 -?/. - c.-12966A>C r.(?) p.(=)
PCDHGA11 NM_018914.2 -?/. - c.-21018A>C r.(?) p.(=)
PCDHGA2 NM_018915.2 -?/. - c.2424+58815A>C r.(=) p.(=)
PCDHGA3 NM_018916.3 -?/. - c.2424+53753A>C r.(=) p.(=)
PCDHGA4 NM_018917.2 -?/. - c.2421+42589A>C r.(=) p.(=)
PCDHGA5 NM_018918.2 -?/. - c.2421+33459A>C r.(=) p.(=)
PCDHGA6 NM_018919.2 -?/. - c.2424+23703A>C r.(=) p.(=)
PCDHGA7 NM_018920.2 -?/. - c.2424+14887A>C r.(=) p.(=)
PCDHGA9 NM_018921.2 -?/. - c.-2743A>C r.(?) p.(=)
PCDHGB1 NM_018922.2 -?/. - c.2409+47541A>C r.(=) p.(=)
PCDHGB2 NM_018923.2 -?/. - c.2421+37654A>C r.(=) p.(=)
PCDHGB3 NM_018924.2 -?/. - c.2415+27401A>C r.(=) p.(=)
PCDHGB5 NM_018925.2 -?/. - c.2083A>C r.(?) p.(Ile695Leu)
PCDHGB6 NM_018926.2 -?/. - c.-7993A>C r.(?) p.(=)
PCDHGB7 NM_018927.3 -?/. - c.-17650A>C r.(?) p.(=)
PCDHGC4 NM_018928.2 -?/. - c.-84964A>C r.(?) p.(=)
PCDHGC5 NM_018929.2 -?/. - c.-89031A>C r.(?) p.(=)
PCDHGA8 NM_032088.1 -?/. - c.2424+4973A>C r.(=) p.(=)


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