Variant #0000524561 (NC_000005.9:g.140802466_140802468del, NC_000005.9(NM_018916.3):c.2425-71908_2425-71906del (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.140802466_140802468del
DNA change (hg38) -
Published as PCDHGA11(NM_018914.2):c.1670_1672del (p.(Asp558del))
ISCN -
DB-ID PCDHGA1_000069
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 ?/. - c.-53218_-53216del r.(?) p.(=)
PCDHGA12 NM_003735.2 ?/. - c.-7861_-7859del r.(?) p.(=)
PCDHGB4 NM_003736.2 ?/. - c.2397+32618_2397+32620del r.(=) p.(=)
PCDHGA1 NM_018912.2 ?/. - c.2422-71908_2422-71906del r.(=) p.(=)
PCDHGA10 NM_018913.2 ?/. - c.2436+7288_2436+7290del r.(=) p.(=)
PCDHGA11 NM_018914.2 ?/. - c.1672_1674del r.(?) p.(Asp558del)
PCDHGA2 NM_018915.2 ?/. - c.2425-71908_2425-71906del r.(=) p.(=)
PCDHGA3 NM_018916.3 ?/. - c.2425-71908_2425-71906del r.(=) p.(=)
PCDHGA4 NM_018917.2 ?/. - c.2421+65278_2421+65280del r.(=) p.(=)
PCDHGA5 NM_018918.2 ?/. - c.2421+56148_2421+56150del r.(=) p.(=)
PCDHGA6 NM_018919.2 ?/. - c.2424+46392_2424+46394del r.(=) p.(=)
PCDHGA7 NM_018920.2 ?/. - c.2424+37576_2424+37578del r.(=) p.(=)
PCDHGA9 NM_018921.2 ?/. - c.2424+17523_2424+17525del r.(=) p.(=)
PCDHGB1 NM_018922.2 ?/. - c.2409+70230_2409+70232del r.(=) p.(=)
PCDHGB2 NM_018923.2 ?/. - c.2421+60343_2421+60345del r.(=) p.(=)
PCDHGB3 NM_018924.2 ?/. - c.2415+50090_2415+50092del r.(=) p.(=)
PCDHGB5 NM_018925.2 ?/. - c.2397+22375_2397+22377del r.(=) p.(=)
PCDHGB6 NM_018926.2 ?/. - c.2418+12279_2418+12281del r.(=) p.(=)
PCDHGB7 NM_018927.3 ?/. - c.2415+2625_2415+2627del r.(=) p.(=)
PCDHGC4 NM_018928.2 ?/. - c.-62275_-62273del r.(?) p.(=)
PCDHGC5 NM_018929.2 ?/. - c.-66342_-66340del r.(?) p.(=)
PCDHGA8 NM_032088.1 ?/. - c.2424+27662_2424+27664del r.(=) p.(=)


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