Variant #0000525410 (NC_000005.9:g.179251086A>C, NM_003900.4:c.530A>C (SQSTM1))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.179251086A>C
DNA change (hg38) g.179824086A>C
Published as SQSTM1(NM_001142298.1):c.278A>C (p.E93A), SQSTM1(NM_003900.5):c.530A>C (p.E177A)
ISCN -
DB-ID SQSTM1_000014 See all 2 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_VUmc
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_VUmc
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2019-12-04 15:24:38 +01:00 (CET)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SQSTM1 NM_003900.4 ?/. - c.530A>C r.(?) p.(Glu177Ala)
MGAT4B NM_014275.4 ?/. - c.-17503T>G r.(?) p.(=)
C5orf45 NM_016175.3 ?/. - c.*13305T>G r.(=) p.(=)


Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our APIs to retrieve data.