Variant #0000532419 (NC_000007.13:g.6048649A>T, NM_000535.6:c.2T>A (PMS2))

Chromosome 7
Allele Unknown
Affects function (as reported) Probably affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.6048649A>T
DNA change (hg38) g.6009018A>T
Published as PMS2(NM_000535.7):c.2T>A (p.M1?)
ISCN -
DB-ID PMS2_000017 See all 7 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 1.0E-5 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2023-01-11 15:44:22 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PMS2 NM_000535.6 +?/. - c.2T>A r.(?) p.(Met1?)
AIMP2 NM_006303.3 +?/. - c.-346A>T r.(?) p.(=)
EIF2AK1 NM_014413.3 +?/. - c.*15655T>A r.(=) p.(=)


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