Variant #0000540184 (NC_000010.10:g.64949209A>G, NC_000010.10(NM_004241.2):c.5581-3T>C (JMJD1C))

Chromosome 10
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.64949209A>G
DNA change (hg38) g.63189449A>G
Published as JMJD1C(NM_032776.2):c.6292-3T>C
ISCN -
DB-ID JMJD1C_000006
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00087 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-08-06 14:59:34 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
REEP3 NM_001001330.2 -?/. - c.-332097A>G r.(?) p.(=)
JMJD1C NM_004241.2 -?/. - c.5581-3T>C r.spl? p.?
JMJD1C NM_032776.1 -?/. - c.6292-3T>C r.spl? p.?


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