Variant #0000544635 (NC_000011.9:g.57480232G>C, NM_015959.3:c.142G>C (TMX2))

Chromosome 11
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.57480232G>C
DNA change (hg38) g.57712760G>C
Published as TMX2(NM_015959.4):c.142G>C (p.G48R)
ISCN -
DB-ID C11orf31_000002
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00303 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-06-30 16:34:47 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CTNND1 NM_001085458.1 -?/. - c.-49573G>C r.(?) p.(=)
BTBD18 NM_001145101.1 -?/. - c.*31374C>G r.(=) p.(=)
TMX2 NM_015959.3 -?/. - c.142G>C r.(?) p.(Gly48Arg)
MED19 NM_153450.1 -?/. - c.-581C>G r.(?) p.(=)
C11orf31 NM_170746.2 -?/. - c.-28836G>C r.(?) p.(=)
TMX2-CTNND1 NR_037646.1 -?/. - n.238G>C r.(?) -


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