Variant #0000554219 (NC_000015.9:g.42143098G>A, NM_016642.3:c.10875C>T (SPTBN5))

Chromosome 15
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.42143098G>A
DNA change (hg38) g.41850900G>A
Published as SPTBN5(NM_016642.4):c.10875C>T (p.S3625=)
ISCN -
DB-ID JMJD7_000011
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00051 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-07-06 10:31:47 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
JMJD7 NM_001114632.1 -?/. - c.*13744G>A r.(=) p.(=)
PLA2G4B NM_001114633.1 -?/. - c.*3040G>A r.(=) p.(=)
JMJD7-PLA2G4B NM_001198588.1 -?/. - c.*3210G>A r.(=) p.(=)
SPTBN5 NM_016642.3 -?/. - c.10875C>T r.(?) p.(Ser3625=)


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