Variant #0000554224 (NC_000015.9:g.42167783T>C, NM_016642.3:c.4160A>G (SPTBN5))

Chromosome 15
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.42167783T>C
DNA change (hg38) g.41875585T>C
Published as SPTBN5(NM_016642.4):c.4160A>G (p.Q1387R)
ISCN -
DB-ID JMJD7-PLA2G4B_000019
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 4.0E-5 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PLA2G4B NM_001114633.1 -?/. - c.*27725T>C r.(=) p.(=)
JMJD7-PLA2G4B NM_001198588.1 -?/. - c.*27895T>C r.(=) p.(=)
SPTBN5 NM_016642.3 -?/. - c.4160A>G r.(?) p.(Gln1387Arg)


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