Variant #0000557780 (NC_000016.9:g.28890092G>T, NM_004320.4:c.100G>T (ATP2A1))

Chromosome 16
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.28890092G>T
DNA change (hg38) g.28878771G>T
Published as ATP2A1(NM_004320.5):c.100G>T (p.E34*)
ISCN -
DB-ID ATP2A1_000003 See all 2 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 4.0E-5 View details
Owner VKGL-NL_Nijmegen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Nijmegen
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2021-09-17 14:40:49 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
ATP2A1 NM_004320.4 +/. - c.100G>T r.(?) p.(Glu34Ter)
SH2B1 NM_015503.2 +/. - c.*5306G>T r.(=) p.(=)
RABEP2 NM_024816.2 +/. - c.*26172C>A r.(=) p.(=)


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