Variant #0000558225 (NC_000016.9:g.4393204T>G, NM_032575.2:c.*5679T>G (GLIS2))

Chromosome 16
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.4393204T>G
DNA change (hg38) g.4343203T>G
Published as CORO7-PAM16(NM_001201479.1):c.2857+4A>C (p.?)
ISCN -
DB-ID CORO7_000008
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 1.0E-5 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-07-09 11:48:57 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CORO7-PAM16 NM_001201479.1 -?/. - c.2857+4A>C r.spl? p.?
PAM16 NM_016069.9 -?/. - c.88+4A>C r.spl? p.?
CORO7 NM_024535.4 -?/. - c.*11955A>C r.(=) p.(=)
GLIS2 NM_032575.2 -?/. - c.*5679T>G r.(=) p.(=)
VASN NM_138440.2 -?/. - c.-28800T>G r.(?) p.(=)


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