Variant #0000559746 (NC_000016.9:g.88925138G>T, NM_000512.4:c.-1853C>A (GALNS))

Chromosome 16
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.88925138G>T
DNA change (hg38) g.88858730G>T
Published as TRAPPC2L(NM_016209.3):c.145G>T (p.(Ala49Ser))
ISCN -
DB-ID GALNS_000038
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2023-11-27 17:27:23 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
GALNS NM_000512.4 -?/. - c.-1853C>A r.(?) p.(=)
PABPN1L NM_001080487.2 -?/. - c.*5026C>A r.(=) p.(=)
TRAPPC2L NM_001318525.1 -?/. - c.145G>T r.(?) p.(Ala49Ser)
TRAPPC2L NM_016209.3 -?/. - c.145G>T r.(?) p.(Ala49Ser)


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