Variant #0000561102 (NC_000017.10:g.3563598G>A, NM_001031681.2:c.1039G>A (CTNS))

Chromosome 17
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.3563598G>A
DNA change (hg38) g.3660304G>A
Published as CTNS(NM_001031681.2):c.1039G>A (p.(Val347Ile))
ISCN -
DB-ID CTNS_000057
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 1.0E-5 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CTNS NM_001031681.2 -?/. - c.1039G>A r.(?) p.(Val347Ile)
P2RX5 NM_002561.3 -?/. - c.*13564C>T r.(=) p.(=)
CTNS NM_004937.2 -?/. - c.1039G>A r.(?) p.(Val347Ile)
TAX1BP3 NM_014604.3 -?/. - c.*3444C>T r.(=) p.(=)
EMC6 NM_031298.2 -?/. - c.-8645G>A r.(?) p.(=)


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