Variant #0000561109 (NC_000017.10:g.3594990G>A, NM_001031681.2:c.*30962G>A (CTNS))

Chromosome 17
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.3594990G>A
DNA change (hg38) g.3691696G>A
Published as P2RX5(NM_001204519.1):c.236C>T (p.(Ser79Leu))
ISCN -
DB-ID CTNS_000060
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00057 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-07-10 18:45:25 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CTNS NM_001031681.2 -?/. - c.*30962G>A r.(=) p.(=)
P2RX5 NM_002561.3 -?/. - c.236C>T r.(?) p.(Ser79Leu)
CTNS NM_004937.2 -?/. - c.*31327G>A r.(=) p.(=)
TAX1BP3 NM_014604.3 -?/. - c.-23170C>T r.(?) p.(=)
EMC6 NM_031298.2 -?/. - c.*22217G>A r.(=) p.(=)
P2RX5-TAX1BP3 NR_037928.1 -?/. - n.635C>T r.(?) -


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