Variant #0000567804 (NC_000019.9:g.47104226T>C, NM_001205281.1:c.1A>G (PPP5D1))

Chromosome 19
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.47104226T>C
DNA change (hg38) g.46600969T>C
Published as PPP5D1(NM_001205281.1):c.1A>G (p.(Met1?))
ISCN -
DB-ID CALM3_000008
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.01261 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-07-16 10:07:14 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PPP5D1 NM_001205281.1 -?/. - c.1A>G r.(?) p.(Met1?)
CALM3 NM_005184.2 -?/. - c.-466T>C r.(?) p.(=)
PNMAL2 NM_020709.1 -?/. - c.-105504A>G r.(?) p.(=)


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