Variant #0000568084 (NC_000019.9:g.50412505G>A, NM_001193646.1:c.-20272G>A (ATF5))

Chromosome 19
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.50412505G>A
DNA change (hg38) g.49909248G>A
Published as NUP62(NM_016553.4):c.560C>T (p.T187M)
ISCN -
DB-ID ATF5_000007
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00116 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-07-18 18:22:55 +02:00 (CEST)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
ATF5 NM_001193646.1 -/. - c.-20272G>A r.(?) p.(=)
IL4I1 NM_001258017.1 -/. - c.-227-4927C>T r.(=) p.(=)
NUP62 NM_153719.3 -/. - c.560C>T r.(?) p.(Thr187Met)


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