Variant #0000578192 (NC_000017.10:g.42078968C>A, NAGS(NM_153006.2):c.-3064C>A)
Chromosome |
17 |
Allele |
Unknown |
Affects function (as reported) |
Affects function |
Affects function (by curator) |
Not classified |
Classification method |
- |
Clinical classification |
NA |
DNA change (genomic) (Relative to hg19 / GRCh37) |
g.42078968C>A |
DNA change (hg38) |
g.44001600C>A |
Published as |
c.-3064C>A |
ISCN |
- |
DB-ID |
NAGS_000019 |
Variant remarks |
functional assays demonstrate that this variant decreases both transcription and binding of HNF-1, a known NAGS transcription factor, to the NAGS gene; not in 1086 controls |
Reference |
- |
ClinVar ID |
- |
dbSNP ID |
- |
Origin |
In vitro (cloned) |
Segregation |
- |
Frequency |
- |
Re-site |
- |
VIP |
- |
Methylation |
- |
Average frequency (gnomAD v.2.1.1) |
Retrieve |
Owner |
Nicholas Ah Mew |
Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
Created by |
Johan den Dunnen |

Variant on transcripts
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