Variant #0000578192 (NC_000017.10:g.42078968C>A, NM_153006.2:c.-3064C>A (NAGS))
| Chromosome |
17 |
| Allele |
Unknown |
| Affects function (as reported) |
Affects function |
| Affects function (by curator) |
Not classified |
| Classification method |
- |
| Clinical classification |
NA |
| DNA change (genomic) (Relative to hg19 / GRCh37) |
g.42078968C>A |
| DNA change (hg38) |
g.44001600C>A |
| Published as |
c.-3064C>A |
| ISCN |
- |
| DB-ID |
NAGS_000019 |
| Variant remarks |
functional assays demonstrate that this variant decreases both transcription and binding of HNF-1, a known NAGS transcription factor, to the NAGS gene; not in 1086 controls |
| Reference |
- |
| ClinVar ID |
- |
| dbSNP ID |
- |
| Origin |
In vitro (cloned) |
| Segregation |
- |
| Frequency |
- |
| Re-site |
- |
| VIP |
- |
| Methylation |
- |
| Average frequency (gnomAD v.2.1.1) |
Retrieve |
| Owner |
Nicholas Ah Mew |
| Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
| Created by |
Johan den Dunnen |
| Date created |
2011-05-23 17:42:17 +02:00 (CEST) |
| Date last edited |
2019-07-19 17:03:22 +02:00 (CEST) |

Variant on transcripts
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