Variant #0000609536 (NC_000005.9:g.140784999_140785003dup, NC_000005.9(NM_018916.3):c.2424+58975_2424+58979dup (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.140784999_140785003dup
DNA change (hg38) -
Published as PCDHGA9(NM_032089.1):c.2480_2484dupGTTTT (p.*829Vfs*?)
ISCN -
DB-ID PCDHGA1_000074
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-12-04 15:24:38 +01:00 (CET)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 ?/. - c.-70685_-70681dup r.(?) p.(=)
PCDHGA12 NM_003735.2 ?/. - c.-25328_-25324dup r.(?) p.(=)
PCDHGB4 NM_003736.2 ?/. - c.2397+15151_2397+15155dup r.(=) p.(=)
PCDHGA1 NM_018912.2 ?/. - c.2421+72327_2421+72331dup r.(=) p.(=)
PCDHGA10 NM_018913.2 ?/. - c.-7744_-7740dup r.(?) p.(=)
PCDHGA11 NM_018914.2 ?/. - c.-15796_-15792dup r.(?) p.(=)
PCDHGA2 NM_018915.2 ?/. - c.2424+64037_2424+64041dup r.(=) p.(=)
PCDHGA3 NM_018916.3 ?/. - c.2424+58975_2424+58979dup r.(=) p.(=)
PCDHGA4 NM_018917.2 ?/. - c.2421+47811_2421+47815dup r.(=) p.(=)
PCDHGA5 NM_018918.2 ?/. - c.2421+38681_2421+38685dup r.(=) p.(=)
PCDHGA6 NM_018919.2 ?/. - c.2424+28925_2424+28929dup r.(=) p.(=)
PCDHGA7 NM_018920.2 ?/. - c.2424+20109_2424+20113dup r.(=) p.(=)
PCDHGA9 NM_018921.2 ?/. - c.2424+56_2424+60dup r.(=) p.(=)
PCDHGB1 NM_018922.2 ?/. - c.2409+52763_2409+52767dup r.(=) p.(=)
PCDHGB2 NM_018923.2 ?/. - c.2421+42876_2421+42880dup r.(=) p.(=)
PCDHGB3 NM_018924.2 ?/. - c.2415+32623_2415+32627dup r.(=) p.(=)
PCDHGB5 NM_018925.2 ?/. - c.2397+4908_2397+4912dup r.(=) p.(=)
PCDHGB6 NM_018926.2 ?/. - c.-2771_-2767dup r.(?) p.(=)
PCDHGB7 NM_018927.3 ?/. - c.-12428_-12424dup r.(?) p.(=)
PCDHGC4 NM_018928.2 ?/. - c.-79742_-79738dup r.(?) p.(=)
PCDHGC5 NM_018929.2 ?/. - c.-83809_-83805dup r.(?) p.(=)
PCDHGA8 NM_032088.1 ?/. - c.2424+10195_2424+10199dup r.(=) p.(=)


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