Variant #0000609537 (NC_000005.9:g.140884973G>A, NM_018916.3:c.2497G>A (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.140884973G>A
DNA change (hg38) -
Published as PCDHGB1(NM_018922.2):c.2482G>A (p.D828N)
ISCN -
DB-ID PCDHGA1_000075
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 1.0E-5 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-12-04 15:24:38 +01:00 (CET)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 ?/. - c.2503G>A r.(?) p.(Asp835Asn)
PCDHGA12 NM_003735.2 ?/. - c.2497G>A r.(?) p.(Asp833Asn)
PCDHGB4 NM_003736.2 ?/. - c.2470G>A r.(?) p.(Asp824Asn)
PCDHGA1 NM_018912.2 ?/. - c.2494G>A r.(?) p.(Asp832Asn)
PCDHGA10 NM_018913.2 ?/. - c.2509G>A r.(?) p.(Asp837Asn)
PCDHGA11 NM_018914.2 ?/. - c.2506G>A r.(?) p.(Asp836Asn)
PCDHGA2 NM_018915.2 ?/. - c.2497G>A r.(?) p.(Asp833Asn)
PCDHGA3 NM_018916.3 ?/. - c.2497G>A r.(?) p.(Asp833Asn)
PCDHGA4 NM_018917.2 ?/. - c.2494G>A r.(?) p.(Asp832Asn)
PCDHGA5 NM_018918.2 ?/. - c.2494G>A r.(?) p.(Asp832Asn)
PCDHGA6 NM_018919.2 ?/. - c.2497G>A r.(?) p.(Asp833Asn)
PCDHGA7 NM_018920.2 ?/. - c.2497G>A r.(?) p.(Asp833Asn)
PCDHGA9 NM_018921.2 ?/. - c.2497G>A r.(?) p.(Asp833Asn)
PCDHGB1 NM_018922.2 ?/. - c.2482G>A r.(?) p.(Asp828Asn)
PCDHGB2 NM_018923.2 ?/. - c.2494G>A r.(?) p.(Asp832Asn)
PCDHGB3 NM_018924.2 ?/. - c.2488G>A r.(?) p.(Asp830Asn)
PCDHGB5 NM_018925.2 ?/. - c.2470G>A r.(?) p.(Asp824Asn)
PCDHGB6 NM_018926.2 ?/. - c.2491G>A r.(?) p.(Asp831Asn)
PCDHGB7 NM_018927.3 ?/. - c.2488G>A r.(?) p.(Asp830Asn)
PCDHGC4 NM_018928.2 ?/. - c.2515G>A r.(?) p.(Asp839Asn)
PCDHGC5 NM_018929.2 ?/. - c.2533G>A r.(?) p.(Asp845Asn)
PCDHGA8 NM_032088.1 ?/. - c.2497G>A r.(?) p.(Asp833Asn)


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