Variant #0000609657 (NC_000005.9:g.179260213G>A, NM_003900.4:c.936G>A (SQSTM1))

Chromosome 5
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.179260213G>A
DNA change (hg38) g.179833213G>A
Published as SQSTM1(NM_001142298.2):c.684G>A (p.R228=), SQSTM1(NM_003900.5):c.936G>A (p.R312=)
ISCN -
DB-ID SQSTM1_000023 See all 5 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.59953 View details
Owner VKGL-NL_Nijmegen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Nijmegen
Date created 2019-12-04 15:24:38 +01:00 (CET)
Date last edited 2023-01-11 15:44:22 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SQSTM1 NM_003900.4 -/. - c.936G>A r.(?) p.(Arg312=)
MGAT4B NM_014275.4 -/. - c.-26630C>T r.(?) p.(=)
C5orf45 NM_016175.3 -/. - c.*4178C>T r.(=) p.(=)


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