Variant #0000613222 (NC_000011.9:g.18305354C>T, NM_181507.1:c.3046G>A (HPS5))

Chromosome 11
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.18305354C>T
DNA change (hg38) g.18283807C>T
Published as HPS5(NM_181507.1):c.3046G>A (p.E1016K)
ISCN -
DB-ID HPS5_000048
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00132 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-12-04 15:24:38 +01:00 (CET)
Date last edited 2021-09-17 14:40:49 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SAA1 NM_000331.4 -?/. - c.*13952C>T r.(=) p.(=)
HPS5 NM_181507.1 -?/. - c.3046G>A r.(?) p.(Glu1016Lys)


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