Variant #0000623437 (NC_000016.9:g.28890438G>T, NC_000016.9(NM_004320.4):c.136+1G>T (ATP2A1))

Chromosome 16
Allele Unknown
Affects function (as reported) Probably affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.28890438G>T
DNA change (hg38) g.28879117G>T
Published as ATP2A1(NM_004320.4):c.136+1G>T
ISCN -
DB-ID ATP2A1_000022 See all 2 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2019-12-06 12:43:26 +01:00 (CET)
Date last edited 2020-07-09 15:02:59 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
ATP2A1 NM_004320.4 +?/. - c.136+1G>T r.spl? p.?
SH2B1 NM_015503.2 +?/. - c.*5652G>T r.(=) p.(=)
RABEP2 NM_024816.2 +?/. - c.*25826C>A r.(=) p.(=)


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