Variant #0000656398 (NC_000010.10:g.100177944C>T, NM_000195.3:c.1928G>A (HPS1))

Chromosome 10
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.100177944C>T
DNA change (hg38) g.98418187C>T
Published as HPS1(NM_001322487.1):c.956G>A (p.G319E)
ISCN -
DB-ID PYROXD2_000009
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00044 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2020-03-23 16:13:27 +01:00 (CET)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
HPS1 NM_000195.3 -?/. - c.1928G>A r.(?) p.(Gly643Glu)
PYROXD2 NM_032709.2 -?/. - c.-3052G>A r.(?) p.(=)


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