Variant #0000656505 (NC_000010.10:g.65024469A>T, NC_000010.10(NM_004241.2):c.-105+3954T>A (JMJD1C))

Chromosome 10
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.65024469A>T
DNA change (hg38) g.63264709A>T
Published as JMJD1C(NM_032776.3):c.389T>A (p.F130Y)
ISCN -
DB-ID JMJD1C_000022
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 8.0E-5 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2020-03-23 16:13:27 +01:00 (CET)
Date last edited 2023-01-11 15:44:22 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
REEP3 NM_001001330.2 ?/. - c.-256837A>T r.(?) p.(=)
JMJD1C NM_004241.2 ?/. - c.-105+3954T>A r.(=) p.(=)
JMJD1C NM_032776.1 ?/. - c.389T>A r.(?) p.(Phe130Tyr)


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