Variant #0000658089 (NC_000017.10:g.3561426C>T, NM_001031681.2:c.809C>T (CTNS))

Chromosome 17
Allele Unknown
Affects function (as reported) Probably affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.3561426C>T
DNA change (hg38) g.3658132C>T
Published as -
ISCN -
DB-ID CTNS_000063
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Nijmegen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Nijmegen
Date created 2020-03-23 16:13:27 +01:00 (CET)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CTNS NM_001031681.2 +?/. - c.809C>T r.(?) p.(Ser270Phe)
P2RX5 NM_002561.3 +?/. - c.*15736G>A r.(=) p.(=)
CTNS NM_004937.2 +?/. - c.809C>T r.(?) p.(Ser270Phe)
TAX1BP3 NM_014604.3 +?/. - c.*5616G>A r.(=) p.(=)
EMC6 NM_031298.2 +?/. - c.-10817C>T r.(?) p.(=)


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