Variant #0000680830 (NC_000017.10:g.3550792C>T, NM_001031681.2:c.116C>T (CTNS))

Chromosome 17
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.3550792C>T
DNA change (hg38) -
Published as CTNS(NM_004937.2):c.116C>T (p.S39L), CTNS(NM_004937.3):c.116C>T (p.S39L)
ISCN -
DB-ID CTNS_000064 See all 2 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00163 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2020-08-06 14:59:34 +02:00 (CEST)
Date last edited 2021-09-17 14:40:49 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CTNS NM_001031681.2 ?/. - c.116C>T r.(?) p.(Ser39Leu)
CTNS NM_004937.2 ?/. - c.116C>T r.(?) p.(Ser39Leu)
TAX1BP3 NM_014604.3 ?/. - c.*16250G>A r.(=) p.(=)


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