Variant #0000689100 (NC_000003.11:g.48508198del, NM_016381.4:c.309del (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.48508198del
DNA change (hg38) -
Published as TREX1(NM_007248.4):c.114delC (p.T39Pfs*16)
ISCN -
DB-ID ATRIP_000051
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2020-09-15 15:50:26 +02:00 (CEST)
Date last edited 2021-09-17 14:40:49 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 +/. - c.309del r.(?) p.(Thr104ProfsTer16)
SHISA5 NM_016479.3 +/. - c.*2314del r.(?) p.(=)
TREX1 NM_033629.3 +/. - c.144del r.(?) p.(Thr49ProfsTer16)
ATRIP NM_130384.2 +/. - c.*1245del r.(?) p.(=)


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