Variant #0000689596 (NC_000006.11:g.10557208C>A, NC_000006.11(NM_145649.4):c.925+27139C>A (GCNT2))

Chromosome 6
Allele Unknown
Affects function (as reported) Probably affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.10557208C>A
DNA change (hg38) -
Published as GCNT2(NM_001491.2):c.552C>A (p.Y184*)
ISCN -
DB-ID GCNT2_000024
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2020-09-15 15:50:26 +02:00 (CEST)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
GCNT2 NM_001491.2 +?/. - c.552C>A r.(?) p.(Tyr184Ter)
GCNT2 NM_145649.4 +?/. - c.925+27139C>A r.(=) p.(=)
GCNT2 NM_145655.3 +?/. - c.-29015C>A r.(?) p.(=)


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