Variant #0000698619 (NC_000010.10:g.102509578_102509579del, PAX2(NM_003990.3):c.119_120del)

Individual ID 00315288
Chromosome 10
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.102509578_102509579del
DNA change (hg38) g.100749821_100749822del
Published as -
ISCN -
DB-ID PAX2_000092 See all 5 reported entries
Variant remarks -
Reference PubMed: Okumura 2015
ClinVar ID -
dbSNP ID -
Origin Germline/De novo (untested)
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Matthew Bower
Database submission license No license selected
Created by Matthew Bower
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PAX2 NM_003990.3 +/+ 2 c.119_120del r.(?) p.(Arg40Hisfs*13)



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000316464 DNA SEQ-NG-I - - PAX2 1 Matthew Bower