Variant #0000718901 (NC_000002.11:g.48808438T>G, NM_000233.3:c.*106398A>C (LHCGR))

Chromosome 2
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.48808438T>G
DNA change (hg38) -
Published as STON1(NM_001198595.2):c.666T>G (p.N222K)
ISCN -
DB-ID GTF2A1L_000013
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 3.0E-5 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2021-02-08 18:36:18 +01:00 (CET)
Date last edited 2021-09-17 14:40:49 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
LHCGR NM_000233.3 ?/. - c.*106398A>C r.(=) p.(=)
STON1-GTF2A1L NM_001198593.1 ?/. - c.666T>G r.(?) p.(Asn222Lys)
GTF2A1L NM_006872.3 ?/. - c.-36576T>G r.(?) p.(=)
STON1 NM_006873.3 ?/. - c.666T>G r.(?) p.(Asn222Lys)


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