Variant #0000720225 (NC_000005.9:g.140741031C>T, NC_000005.9(NM_018916.3):c.2424+15007C>T (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.140741031C>T
DNA change (hg38) -
Published as PCDHGB2(NM_018923.2):c.1329C>T (p.S443=)
ISCN -
DB-ID PCDHGA1_000078
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2021-02-08 18:36:18 +01:00 (CET)
Date last edited N/A
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 -?/. - c.-114653C>T r.(?) p.(=)
PCDHGA12 NM_003735.2 -?/. - c.-69296C>T r.(?) p.(=)
PCDHGB4 NM_003736.2 -?/. - c.-26421C>T r.(?) p.(=)
PCDHGA1 NM_018912.2 -?/. - c.2421+28359C>T r.(=) p.(=)
PCDHGA10 NM_018913.2 -?/. - c.-51712C>T r.(?) p.(=)
PCDHGA11 NM_018914.2 -?/. - c.-59764C>T r.(?) p.(=)
PCDHGA2 NM_018915.2 -?/. - c.2424+20069C>T r.(=) p.(=)
PCDHGA3 NM_018916.3 -?/. - c.2424+15007C>T r.(=) p.(=)
PCDHGA4 NM_018917.2 -?/. - c.2421+3843C>T r.(=) p.(=)
PCDHGA5 NM_018918.2 -?/. - c.-2867C>T r.(?) p.(=)
PCDHGA6 NM_018919.2 -?/. - c.-12620C>T r.(?) p.(=)
PCDHGA7 NM_018920.2 -?/. - c.-21436C>T r.(?) p.(=)
PCDHGA9 NM_018921.2 -?/. - c.-41489C>T r.(?) p.(=)
PCDHGB1 NM_018922.2 -?/. - c.2409+8795C>T r.(=) p.(=)
PCDHGB2 NM_018923.2 -?/. - c.1329C>T r.(?) p.(Ser443=)
PCDHGB3 NM_018924.2 -?/. - c.-8931C>T r.(?) p.(=)
PCDHGB5 NM_018925.2 -?/. - c.-36664C>T r.(?) p.(=)
PCDHGB6 NM_018926.2 -?/. - c.-46739C>T r.(?) p.(=)
PCDHGB7 NM_018927.3 -?/. - c.-56396C>T r.(?) p.(=)
PCDHGC4 NM_018928.2 -?/. - c.-123710C>T r.(?) p.(=)
PCDHGC5 NM_018929.2 -?/. - c.-127777C>T r.(?) p.(=)
PCDHGA8 NM_032088.1 -?/. - c.-31350C>T r.(?) p.(=)


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